core 21内核, AN通吃, lin/win Project 9712 to FAH

金鹏

期待21内核下能解决A卡效率减半问题
随之推出了FahCore_21 Version 0.0.11以替代FahCore_21 Version 0.0.6版本,
据说新版本解决了0.0.6下显存占用过大的问题(老版本跑9704包时GPU MC占用达到52%)

*运行FahCore_21 Version 0.0.11内核需要Nvidia driver version 350+ which supports OpenCL 1.1

FahCore_21 Version 0.0.11.rar (2.35 MB, 下载次数: 9)

2015-8-9 09:53 上传

点击文件名下载附件
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Core 21 v0.0.11 moving to FAH with p9704, p9712

by mpharrigan » Fri Aug 21, 2015 2:18 am

Project 9704 and 9712 are moving to full FAH! This is the first time core 21 for GPUs will be made generally available. We've been working the past 6 months on making sure it can handle the most challenging and new questions in protein dynamics. Core 21 uses version 6.2 of OpenMM. This build has been prepared with careful consideration of AMD and Nvidia gpu performance.

OS: Linux / Windows
Timeout: 3 days
Deadline: 5 days

p9704
Desc: Voltage gated sodium channel
Atoms: 175k
Base credit: 9000
Extra restriction: 64 bit operating systems only, >2gb system ram

p9712
Desc: Trek2 tandem-pore potassium channel
Atoms: 80k
Base credit: 6300

Re: Core 21 (GPU, Win64) p9704

by mpharrigan » Thu Aug 06, 2015 8:18 am

Hopefully you beta testers will receive x21 v0.0.11 via 9712 and possibly run some 9704 WUs with it. Please report successes and failures so we can look to roll out the new x21 build to advanced!

Core 21 v0.0.11 moving to advanced with p9704, p9712

by mpharrigan » Fri Aug 14, 2015 7:14 am

Project 9704 and 9712 are moving to advanced with the new-and-improved v0.0.11 version of core 21 for GPUs.

OS: Linux / Windows
Timeout: 3 days
Deadline: 5 days

p9704
Atoms: 175k
Base credit: 9000
Extra restriction: 64 bit operating systems only, >2gb system ram

p9712
Atoms: 80k
Base credit: 6300

Project 9712 [core 21, gpu, lin/win]

by mpharrigan » Sat Aug 01, 2015 6:23 am

Hi All,
I'm releasing p9712 for beta testing. This is the "trek 2" potassium "tandem pore" ion channel. We are studying its dynamics in a collaboration with Pfizer.

Runs: 100
Clones: 40
Gens: 390
Base credit: 6300
Timeout: 3 day
Deadline: 5 days
Number of atoms: ~80k

This project has a minimum core 21 version of 0.0.10, which is the latest build including a fix for reported memory leaks (ie increased memory usage over the course of a WU). Let me know if you run into any problems!

acp134

虽然不至于效率减半，但是PPD也没有Core17高

Lynt

早上加了beta参数，接到一堆104XX包，PPD都在30W上下，再坚持两天接不到新包就改回去罢了，最近太忙，潜水模式开启中

Lynt

早上接了个9704，发现Core21内核还是之前的0.0.8，然后log中一堆警报，让我不解的是居然没有花（黑）屏，PPD 32W+
下午把显卡驱动更新到352.30，赞一下新版驱动，可以直接安装，不像之前的版本直接更新总是安装失败，要装回Linx自带驱动再装新版本。
重启后发现无法开始运算，提示没有显卡，检查发现不知何时GPUs.txt变成0字节大小了，赶紧从官网下载更新，顺便把Core21更新到0.0.11版本，现在又接了个9704正常运算中，没有报警，但是PPD比前一个低了点，只有31W不到
昨天改beta参数PPD就大降，目前还是不建议加参数跑

Lynt

昨晚跑了一个9712，PPD应该很低，TPF 104.73秒（1分44－45秒）

1. 12:22:20:WU00:FS01:0x21:Completed 0 out of 1280000 steps (0%)
   
2. 12:22:20:WU00:FS01:0x21:Temperature control disabled. Requirements: single Nvidia GPU, tmax must be < 110 and twait >= 900
   
3. 12:22:33:WU01:FS01:Upload complete
   
4. 12:22:33:WU01:FS01:Server responded WORK_ACK (400)
   
5. 12:22:33:WU01:FS01:Final credit estimate, 45151.00 points
   
6. 12:22:33:WU01:FS01:Cleaning up
   
7. 12:24:08:WU00:FS01:0x21:Completed 12800 out of 1280000 steps (1%)
   
8. 12:25:51:WU00:FS01:0x21:Completed 25600 out of 1280000 steps (2%)
   
9. 12:27:35:WU00:FS01:0x21:Completed 38400 out of 1280000 steps (3%)
   
10. 12:29:18:WU00:FS01:0x21:Completed 51200 out of 1280000 steps (4%)
    
11. 12:31:02:WU00:FS01:0x21:Completed 64000 out of 1280000 steps (5%)
    
12. 12:32:46:WU00:FS01:0x21:Completed 76800 out of 1280000 steps (6%)
    
13. 12:34:35:WU00:FS01:0x21:Completed 89600 out of 1280000 steps (7%)
    
14. 12:36:18:WU00:FS01:0x21:Completed 102400 out of 1280000 steps (8%)
    
15. 12:38:02:WU00:FS01:0x21:Completed 115200 out of 1280000 steps (9%)
    
16. 12:39:45:WU00:FS01:0x21:Completed 128000 out of 1280000 steps (10%)
    
17. 12:41:29:WU00:FS01:0x21:Completed 140800 out of 1280000 steps (11%)
    
18. 12:43:12:WU00:FS01:0x21:Completed 153600 out of 1280000 steps (12%)
    
19. 12:45:02:WU00:FS01:0x21:Completed 166400 out of 1280000 steps (13%)
    
20. 12:46:46:WU00:FS01:0x21:Completed 179200 out of 1280000 steps (14%)
    
21. 12:48:30:WU00:FS01:0x21:Completed 192000 out of 1280000 steps (15%)
    
22. 12:50:13:WU00:FS01:0x21:Completed 204800 out of 1280000 steps (16%)
    
23. 12:51:57:WU00:FS01:0x21:Completed 217600 out of 1280000 steps (17%)
    
24. 12:53:41:WU00:FS01:0x21:Completed 230400 out of 1280000 steps (18%)
    
25. 12:55:31:WU00:FS01:0x21:Completed 243200 out of 1280000 steps (19%)
    
26. 12:57:14:WU00:FS01:0x21:Completed 256000 out of 1280000 steps (20%)
    
27. 12:58:58:WU00:FS01:0x21:Completed 268800 out of 1280000 steps (21%)
    
28. 13:00:41:WU00:FS01:0x21:Completed 281600 out of 1280000 steps (22%)
    
29. 13:02:25:WU00:FS01:0x21:Completed 294400 out of 1280000 steps (23%)
    
30. 13:04:08:WU00:FS01:0x21:Completed 307200 out of 1280000 steps (24%)
    
31. 13:05:51:WU00:FS01:0x21:Completed 320000 out of 1280000 steps (25%)
    
32. 13:07:41:WU00:FS01:0x21:Completed 332800 out of 1280000 steps (26%)
    
33. 13:09:25:WU00:FS01:0x21:Completed 345600 out of 1280000 steps (27%)
    
34. 13:11:08:WU00:FS01:0x21:Completed 358400 out of 1280000 steps (28%)
    
35. 13:12:52:WU00:FS01:0x21:Completed 371200 out of 1280000 steps (29%)
    
36. 13:14:35:WU00:FS01:0x21:Completed 384000 out of 1280000 steps (30%)
    
37. 13:16:19:WU00:FS01:0x21:Completed 396800 out of 1280000 steps (31%)
    
38. 13:18:08:WU00:FS01:0x21:Completed 409600 out of 1280000 steps (32%)
    
39. 13:19:52:WU00:FS01:0x21:Completed 422400 out of 1280000 steps (33%)
    
40. 13:21:36:WU00:FS01:0x21:Completed 435200 out of 1280000 steps (34%)
    
41. 13:23:19:WU00:FS01:0x21:Completed 448000 out of 1280000 steps (35%)
    
42. .
    
43. .
    
44. .
    
45. 15:16:53:WU00:FS01:0x21:Completed 1280000 out of 1280000 steps (100%)

复制代码

赶紧改掉参数，有些core18包太毒

金鹏

Lynt 发表于 2015-8-12 08:48
昨晚跑了一个9712，PPD应该很低，TPF 104.73秒（1分44－45秒）赶紧改掉参数，有些core18包太毒 ...

TPF=1:44的9712应该甜了,接近30万PPD

我的970在1486下TPF=1:38大概32万PPD

Lynt

金鹏 发表于 2015-8-12 10:51
TPF=1:44的9712应该甜了,接近30万PPD

我的970在1486下TPF=1:38大概32万PPD

现在不确定是升级驱动还是跑过core21的原因，PPD大降，跑9430从之前的36W+ 掉到 32W+（昨晚有个10490才22W），我等这个包跑完重启确认一下，如果是驱动问题就先装回346.47

Lynt

确定Linux下352.30驱动效率低下，9127包只有29W+，已"滚回"346.47版驱动，明天有结论，可惜刚才处理不当，之前跑的9127爆包了，没有直接对比

dutian_007

a卡现在怎么活？我全是a卡！

chaoyzj

Lynt 发表于 2015-8-12 19:42
确定Linux下352.30驱动效率低下，9127包只有29W+，已"滚回"346.47版驱动，明天有结论，可惜刚才处理不当， ...

我Fedora22，驱动是最新版的，这么说，难道是废了？

Lynt

chaoyzj 发表于 2015-8-17 16:21
我Fedora22，驱动是最新版的，这么说，难道是废了？

我在Ubuntu Kylin 14.10下面测出来确实差太远