即将推出的新项目-抗击COVID-19

hexiehao · 发表于 2020-4-1 21:10:40

本帖最后由 hexiehao 于 2020-4-1 21:10 编辑

如图
公告网址https://www.ibm.org/OpenPandemics

freestman · 发表于 2020-4-1 21:42:52

期待

明日菜鸡 · 发表于 2020-4-2 14:02:05

coming sooooooon

周安国 · 发表于 2020-4-2 14:41:54

我已经准备好了！！！

牵牛星 · 发表于 2020-4-3 14:20:57

一些关于OpenPandemics的初步信息

The OpenPandemics project will have two objectives: first, to screen chemical compounds as potential treatments for COVID-19; second, to develop and make available tools & methods to streamline the computational drug discovery process, to be deployed against future pandemics.
We haven't finalized the specific system requirements for the project yet. The research application currently runs on Windows, Mac and Linux.
At launch, the project will run on CPU.

oooj · 发表于 2020-4-4 21:35:16

期待

lothlorien · 发表于 2020-4-4 22:20:17

准备就绪，F@H跑显卡ing，COVID项目出来后就把CPU时间分给WCG

BUNNY · 发表于 2020-4-5 12:21:57

Rosetta@home也要推出了

https://boinc.bakerlab.org/rosetta/forum_thread.php?id=13702

Rosetta@home: Help in the fight against COVID-19!

With the recent COVID-19 outbreak, R@h has been used to predict the structure of proteins important to the disease as well as to produce new, stable mini-proteins to be used as potential therapeutics and diagnostics, like the one displayed above which is bound to part of the COVID-19 spike protein.

To help our research, we are happy to announce a new application update, and thanks to the help from the Arm development community, including Rex St. John, Dmitry Moskalchuk, David Tischler, Lloyd Watts, and Sahaj Sarup, we are excited to also include the Linux-ARM platform. With this update we will continue to make protein binders to COVID-19 and related targets using the latest Rosetta source.

Thank you R@h volunteers for your continued support to this project. Your CPU hours are used not only to accurately model the structures of important proteins, but to design new ones as well. Let's band together and fight COVID-19!

More details will be available in the Discussion of this news post.

BUNNY · 发表于 2020-4-5 12:23:52

這樣可以比較一下哪裡比較穩定，
Folding的WU時有時無，網路又比較慢；
如果WCG/Rosetta可以穩定供WU，
那我會切過去。

現在都要自己注意，看到Folding沒WU，就要去把WCG打開，花時間/沒效率

zichen · 发表于 2020-4-5 13:23:10

BUNNY 发表于 2020-4-5 12:23
這樣可以比較一下哪裡比較穩定，
Folding的WU時有時無，網路又比較慢；
如果WCG/Rosetta可以穩定供WU，

还是建议GPU跑FAH，CPU跑WCG

牵牛星 · 发表于 2020-4-6 01:45:21

一些更新：项目组有加入GPU计算的打算；未来屯包数量将被进一步限制，每台设备只能屯线程数（原文是核数，但BOINC目前貌似只能识别逻辑线程数）两倍的任务包

We hope to integrate the GPU version into World Community Grid at some point in the future (no ETA), but the priority right now is to get the project launched as quickly as possible.

Due to an issue with Android work units clogging the system, we started working on a mechanism that would limit the number of concurrent workunits allowed per core based on application version id. This means that a device that downloads windows 64 bit version of it may be limited to say 2 for every core they have. An 8 core machine would only be allowed to have 16 total work units on their machine. We are still working on this feature but hope to have it deployed in advance of OpenPandemics. This will be a configuration on the database side so limits can be easily lifted or shifted.

alexpon · 发表于 2020-4-6 16:19:37

本帖最后由 alexpon 于 2020-4-6 16:25 编辑

rosetta@home 先跑吧
https://boinc.bakerlab.org/rosetta/forum_thread.php?id=13702
參考囉應沒法指定包,但我是有載到
2020/4/6 下午 02:15:01 | Rosetta@home | Scheduler request completed: got 3 new tasks
2020/4/6 下午 02:15:03 | Rosetta@home | Started download of rosetta_4.12_windows_intelx86.exe
2020/4/6 下午 02:16:01 | Rosetta@home | Finished download of 8cx5cm5v_Mini_Protein_binds_IL1R_COVID-19_design2.zip
2020/4/6 下午 02:16:02 | Rosetta@home | Finished download of 8cx5cm5v_Mini_Protein_binds_IL1R_COVID-19_design2.flags
2020/4/6 下午 02:16:05 | Rosetta@home | Finished download of 1uq6kp3y_Mini_Protein_binds_IL1R_COVID-19_design2.zip
2020/4/6 下午 02:16:06 | Rosetta@home | Finished download of 1uq6kp3y_Mini_Protein_binds_IL1R_COVID-19_design2.flags
2020/4/6 下午 02:16:09 | Rosetta@home | Finished download of 3vs9ys6d_Mini_Protein_binds_IL1R_COVID-19_design2.zip
2020/4/6 下午 02:16:11 | Rosetta@home | Finished download of 3vs9ys6d_Mini_Protein_binds_IL1R_COVID-19_design2.flags
2020/4/6 下午 02:20:09 | Rosetta@home | Finished download of minirosetta_database_357d5d93529_n_methyl.zip
2020/4/6 下午 02:20:14 | Rosetta@home | Starting task 1uq6kp3y_Mini_Protein_binds_IL1R_COVID-19_design2_SAVE_ALL_OUT_905258_2_0
2020/4/6 下午 02:23:24 | Rosetta@home | Starting task 3vs9ys6d_Mini_Protein_binds_IL1R_COVID-19_design2_SAVE_ALL_OUT_905258_2_0

Folding@home 也有 COVID-19 項目 CPU 包，應沒法指定包，但要掛個流覽器 (IE....) 視窗

Tlabs · 发表于 2020-4-7 18:16:11

我这边也收到了，加油，雄起

wpf999 · 发表于 2020-4-7 18:54:19

BUNNY 发表于 2020-4-5 12:23
這樣可以比較一下哪裡比較穩定，
Folding的WU時有時無，網路又比較慢；
如果WCG/Rosetta可以穩定供WU，

fah加beta参数，接包无忧

Tlabs · 发表于 2020-4-8 13:48:58

wpf999 发表于 2020-4-7 18:54
fah加beta参数，接包无忧

FAH小白求教，哪里加

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